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Module membership and gene significance

Web Module membership and corresponding gene significance and protein-protein interaction (PPI) network construction of two key modules. (A) Module membership … Web6 mrt. 2024 · Finally, we used the overlapping data to identify hub genes. out of a total of 12 identified modules by WGCNA, the blue module was find to have the most statistically significant correlation with prednisolone resistance and Nine genes including SOD1, CD82, FLT3, GART, HPRT1, ITSN1, TIAM1, MRPS6, MYC were recognized as hub genes …

Placental Gene Co-expression Network for Maternal Plasma Lipids ...

Web21 okt. 2024 · Correlations between gene module memberships and gene significance for the module “darkred” and Total cholesterol and LDL-C and for the module “purple” and HDL-C. The genes included in the “darkred” module were enriched in canonical IPA disease and function pathways mostly related to inflammatory response and disease … WebVisualization of gene significance (GS) vs. module membership (MM) and gene expression levels of significant modules. Scatterplot represents the GS and MM of … scribus ita online https://visitkolanta.com

Gene coexpression network analysis reveals a novel metabolic …

Web9 feb. 2024 · Module membership (MM) and gene significance (GS) revealed the correlation between the gene expression and infiltrated immune cell abundance. Genes in modules that were highly associated with infiltrated immune cells (correlation ≥ 0.7 and p value ≤ 0.05) were extracted for further study (GS ≥ 0.5 and MM ≥ 0.5). Web1.横坐标：Module Membership in brown module，翻译过来就是：在棕色模块中的模块成员。模块成员是什么鬼？ 2.纵坐标：Gene Significance (GS) for weight，关于体重这个性状的基因显著性。基因显著性又是什么鬼？ Web22 apr. 2024 · We therefore selected the pink model for subsequent analysis. We performed an intramodular analysis for the pink module, and the module membership and gene significance showed a very meaningful correlation (and ), indicating that the 160 genes in the pink module tend to be remarkably correlated with NK cells resting infiltration level … payper n penitentiary

Identification of Susceptibility Modules and Genes for ... - PubMed

Category:Calculation of module membership in WGCNA - Bioconductor

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Module membership and gene significance

Module preservation analysis and functional enrichment of …

Web10 mei 2024 · Genes with a significance over 0.2 and a module membership over 0.8 were used as hub genes. Subsequently, we screened these hub genes in the published … Web23 mrt. 2024 · A total of 432 genes were included in the turquoise module . Moreover, we illustrated in turquoise the module membership and gene significance for AF with stroke (correlation coefficient = 0.32, P < 0.001) . In addition, genes in the turquoise module were overlapped with DEGs in GSE66724.

Module membership and gene significance

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Web27 aug. 2024 · Mechanically, the potential regulators of blue module were investigated. These findings highlight an important role of the blue module and its affiliated genes in … Web7 jul. 2024 · Gene significance (GS) was the correlation coefficient between the expression value of a gene and a phenotype, representing the association between genes and …

Web Module membership and corresponding gene significance and protein-protein interaction (PPI) network construction of two key modules. (A) Module membership in the turquoise module.... Web12 aug. 2024 · Just like what have been said, I analyzed the genes in key module by DAVID, with P < 0.05 considered statistically significant. PPI network construction and module selection. According to the standard of gene significance (GS) > 0.3 and module membership (MM) > 0.8, I selected 83 hub genes from the key module.

WebContent may be subject to copyright. Module and eigengene network plots. A. Barplot of mean gene significance across modules. In this example we use a trait-based gene significance, Equation 2 ... WebWe found a module whose eigengene is highly associated with disease status and whose GO results indicate the module genes are associated with inflammatory processes that …

Web10 apr. 2024 · We constructed a protein-protein interaction network from DEGs followed by network clustering. Members of the two most extensive modules went under the enrichment analysis. We introduced a number of hub genes and gene families playing essential roles in oncogenic pathways and the pathogenesis of gastric cancer.

Webwhere m was the number of transcript isoforms of gene i as annotated by the Ensemble Database (Version 75). Note that single-transcript genes were excluded from this analysis. Correlations between module members and known cancer-related genes. The expressions of the genes involved in three cancer-related pathways annotated by Kyoto … scribus in docx umwandelnWeb21 feb. 2024 · Highly significant correlations were observed between gene significance and module membership in each of these three modules. (D) GO and KEGG … pay per outcomeWebDownload scientific diagram Correlations between gene module memberships and gene significance for the modules associated with clinical traits. from publication: Gene Co-expression Networks Are ... scribus latest download freeWeb10 jun. 2024 · Combining the identified WGCNA modules to meta-modules and subsequent analysis of this meta-modules demonstrated a high correlation with HD (correlation r = 0.5, p-value = 1e-38), a positive correlation between gene significance and module membership of 0.73 (p-value = 2e-54), and the highest mean gene … scribus ita downloadscribus ipadWeb16 jun. 2024 · Gene module membership measures how close the expression pattern of a gene is to its eigengene. It is expected that genes with high module membership will have more important functions in the module and are more likely to be related to clinical traits. scribus indirWeb11 nov. 2024 · 1.横坐标：Module Membership in brown module，翻译过来就是：在棕色模块中的模块成员。模块成员是什么鬼？ 2.纵坐标：Gene Significance (GS) for weight， … scribus informacion